Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKHSHYKDKKKFYKKVEQFKEFQERISVHFQNEKLLYQAFTHSSYVNEHRKKPYEDNERLEFLGDAVLELTISRFLFAKYPAMSEGDLTKLRAAIVCEPSLVSLAHELSFGDLVLLGKGEEMTGGRKRPALLADVFEAFIGALYLDQGLE---PVESFLKVY---VFPKINDGAFSHVMDFKSQLQEYVQRDGKGSLEYKISNEKGPAHNREFEAIVSLKGEPLGVGNGRSKKEAEQHAAQEALAKLQKHHTKQ
4M2Z Chain:B ((3-218))------------------MLEQLEKKLGYTFKDKSLLEKALTHVSY---SKKEHYET---LEFLGDALVNFFIVDLLVQYSPNKREGFLSPLKAYLISEEFFNLLAQKLELHKFIRIKR------GKINETIIGDVFEALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKK--DYKTILQEITQKRWKERPEYRLISVEGPHHKKKFIVEAKIK-EYRTLGEGKSKKEAEQRAAEELIKLLE------


General information:
TITO was launched using:
RESULT:

Template: 4M2Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 840 -96894 -115.35 -461.40
target 2D structure prediction score : 0.67
Monomeric hydrophicity matching model chain B : 0.80

3D Compatibility (PKB) : -115.35
2D Compatibility (Sec. Struct. Predict.) : 0.67
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.608

(partial model without unconserved sides chains):
PDB file : Tito_4M2Z.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4M2Z-query.scw
PDB file : Tito_Scwrl_4M2Z.pdb: