Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNLYEIMLEHFAPKGSERGIFTYLLAQSDEEVYEWL------------KTDPSLSDGRAVYTPYQDNEANGKTYAIYNQSFDIVGHEKYKDRM-----IRLKGE-LNDEVELTDLYYGMTLVGWSMVKSD----IPSEQIELLKDTGISIESA-
3N9B Chain:A ((18-169))------LLRYCVQKHDASRLHYDFRLELDGTLKSWAVPKGPCLDPAVKRLAVQVEDHPLDYADFEGSIPQAGDVIVWDRGAWTPLDDPREGLEKGHLSFALDGEKLSGRWHLIRTNLRGKQSQWFLVKAKDGEARSLDRFDVLKERPDSVLSER


General information:
TITO was launched using:
RESULT:

Template: 3N9B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 604 8871 14.69 70.97
target 2D structure prediction score : 0.33
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : 14.69
2D Compatibility (Sec. Struct. Predict.) : 0.33
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.111

(partial model without unconserved sides chains):
PDB file : Tito_3N9B.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3N9B-query.scw
PDB file : Tito_Scwrl_3N9B.pdb: