Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKVKKLVVVSMLSSIAFVLMLLNFPFPGLPDY-----LKIDFSDVPAIIAILIY-----------GPLAGIAVEAIKNVLQYIIQGSMAGVPVGQVANFIAGTLFILPTAFLFKKL----------NSAKGLAVSLLLGTAAMTILMSILNYVLILPAYTWFLHSPALSDS------ALKTAVVAGILPFNMIKGIVITV-------VFSLIFIKLKPWIEQQRSAHIH------------------------------------------------------
3QOE Chain:A ((2-296))--SNDVDLIKRLGPSAMDQIMLYLAFSAMRTSGHRHGAFLDAAATAAKCAIYMTYLEQGQNLRMTGHLHHLEPKRVKAIVEEVRQALTEGKLLKMLGSQEPRYLIQFPYVWMEKYPWRPGRSRIPGTSLTSEEKRQIEQKLPSNLPDAHLITSFEFLELIEFLHKRSQEDLPKEHQMPLSEALAEHIKRRLLYSGTVTRIDSPWGMPFYALTRDQERTYIMVEDTARFFRMMRDWAEKRPNTMRVLEELDILPEKMQQAKDELDEIIRAWADPVVLQMVFGKK


General information:
TITO was launched using:
RESULT:

Template: 3QOE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 539 -26095 -48.41 -138.80
target 2D structure prediction score : 0.44
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -48.41
2D Compatibility (Sec. Struct. Predict.) : 0.44
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.102

(partial model without unconserved sides chains):
PDB file : Tito_3QOE.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3QOE-query.scw
PDB file : Tito_Scwrl_3QOE.pdb: