Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRLDKLLANSGYGSRKEVKAVVKAGAVMIDGKPAKDVKEHVDPDTQEVTVYGEPVDYRE---FIYLMMNKPQGVLSATEDSRQQTVVDLLTPEEMRFEPFPAGRLDKDTEGFLLLTNDGQLAHRLLSPKKHVPKTYEVHLKSQISREDISDLETGVYIEGGYKTKPAKAEIKTNDSGNTVIYLTITEGKYHQVKQMAKAVGNEVVYLKRLSMGRVSLDPALAPGEYRELTEEELHLLNEPQA
3DH3 Chain:B ((7-229))VRLNKYISESGICSRREADRYIEQGNVFLNGKRAT-IGDQVKPG-DVVKVNGQLIEPREAEDLVLIALNKPVGIVSTTEDGERDNIVDFVNHSK---RVFPIGRLDKDSQGLIFLTNHGDLVNKILRAGNDHEKEYLVTVDKPITEEFIRGMSAGVPILGTVTKKCKVKK-----EAPFVFRITLVQGLNRQIRRMCEHFGYEVKKLERTRIMNVSLS-GIPLGEWRDLTDDEL--------


General information:
TITO was launched using:
RESULT:

Template: 3DH3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1008 6692 6.64 30.42
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain B : 0.82

3D Compatibility (PKB) : 6.64
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.506

(partial model without unconserved sides chains):
PDB file : Tito_3DH3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3DH3-query.scw
PDB file : Tito_Scwrl_3DH3.pdb: