Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMSLLWVFYQNNVQKLNLSNLPSSHPVTIGPDVKDSVTISTIPFNSGVISLKRKESGGQYEVFLGNDCLGTIETDISFTLQTDQQDIRLILTGSEPEKSVYFTGNRDEIVCSSEKTNADIYLNPQDFAFAEQSTFSLLRAGGSWSVRPESGTIFLNGEKINANTPLKPGDEIFWNFTQMRVTEQDLLEIVHYAQFETALTETVKPSTEMQKKYPQYRRTPRMVYDLPDDRVSFSFPSQESDQTNRGLWLVILPPLVMLIVMGVVAIIQPRGIFILVSLAMFMMTLITSTVQYFRDKNQRKKREEKRERVYKLYLDNKRKELQALAEKQKQVLEFHFPSFEQMKYLTSEISDRIWEKSLESKDYLQLRLGTGTVPSSYEINMSGGDLANRDIDDLMEKSQHMQRVYKDIRNAPVTVDLAEGPMGLVGKSQIVKNEIHQLIGQLSFFNSYHDLRFVFIFHEEEYKDWEWMKWLPQFQMPHIYAKGFIYNEQTRDQLLSSLYELIRERDLEDDKEKLQFKPHFVFVITNQQLISEHVILEYLEGQHEHLGISTIVAAETKESLSENITTLVRYINEHEGDILIQKKKAVRIPFRLDHHQREDNERFSRTLRTLNHQVGITNSIPETVSFLELFHAKEVKEIGIQQRWLTSESSKSLSVPIGYKGK-----DDIVYLNLHEKAHGPHGLLAGTTGSGKSEFLQTYILSLAVHFHPHEAAFLLIDYKGGGMAQPFRNIPHLLGTITNIEGSKNFSMRALASIKSELKKRQRLFDQYQVNHINDYTKLYKQGKAEVAMPHLFLISDEFAELKSEEPDFIRELVSAARIGRSLGVHLILATQKPGGIIDDQIWSNSRFKVALKVQDATDSKEILKNSDAANITVTGRGYLQVGNNEVYELFQSAWSGAPYLEEVYGTEDEIAIVTDTGLIPLSEVDTEDNAKKDVQTEIEAVVDEIERIQDEMGIEKLPSPWLPPLAERIPRTLFPSNE-----KDHFHFAYVDEPDLQRQAPIAYKMMEDGNIGIFGSSGYGKSIAAATFLMSFADVYTPEELHVYIFDFGNGTLLPLAKLPHTADYFLMDQSRKIEKFMIRIKEEIDRRKRLFREKEISHIKMYNALSEEELPFIFITIDNFDIVKDEM-HELESEFVQLSRDGQSLGIYFMLTATRVNAVR--QSLL-NNLKTKIVHYLMDQSEGYSIYGRPKF--NLEPIPGRVIIQKE-ELYFAQMFLPVDADDDIGMFNELKSDVQKLQGRFASMEQPAPIPMLPESLSTRELSIRFKLERKPLSVPIGLHEETVSPVYFDLGKHKHCLILGQTQRGKTNVLKVMLEHLIDDETEMIGLFDSIDRGLSHYAKESDVSYLETKEDIEQWIETAEDIFKTREAMYVEAVRQGDAQNLRFSQVVLMIDGITRFQQTIDTRIQDRLANFMKSYAHLGFSFIPGGNHSEFSKGYDSLTTEMKQIRHAILLMKKSEQNVIPLPYQRQEPEIQPGFGYVVENGKEQKVQIPLCSAERESAR
4LYA Chain:A ((48-558))--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ANAFPIGLKDEPELQSQSDYFYQWL---EDGNIGIFGSAGYGKSTTMMTLLLSFAGAYNPAQLHYYIFDFGNS-ALLPLRQLPHTADYFRLDDEKK--IEKFIKFMKEEMEQRKQRFMEKEVSTIKLYNALS-----EEKLPIIIVALDNFDVVKEEMPDFETQLIQYARDGQSLGIFFIMTATRVS-GIRPPLMNNLKTKIVHYFIDSSEKFSLIGRTPYDVDPIPGRALIKKDN---AALTQIYLPADGED---------------------------------DIEVLENVKREMERLKEVYQHI-PKPKPIPMLPPRLSMSVFTNTYVQHRASGFIPVGL----DEQTVRPVAINMRTDPHCLIVGQSRKGKTNVVKVILESLLVQ-E--PESIGLLDGIDRGLAGYANRD---DITYIEAKERLAQWLNEADAVLQQREREYIQAVN-------------WPPVVFVVDSLLRLQQETDSIMQGRIANMMKQYSHLGFHVFVAGNANEFVKGFDALTAELKQIRQAILVTKK-SEQSLFALPFTRNEQEIEPGFGYFVVGGKDQKIQIPKV----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4LYA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2360 52199 22.12 107.40
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : 22.12
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.481

(partial model without unconserved sides chains):
PDB file : Tito_4LYA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4LYA-query.scw
PDB file : Tito_Scwrl_4LYA.pdb: