Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ML-----------------TLPDDRAP---TGLPDPGIE----ALAHTKIASTISTVVADGYAVVLSTADIANSLLANAIG--YPIAASVAL-----VTPAAGANSSCWPADPSQHHRIAESRACA---------
2JOZ Chain:A ((1-135))
MIMVSGCQQQKEETPFYYGTWDEGRAPGPTDGVKSATVTFTEDEVVETEVMEGRGEVQLPFMAYKVISQSTDGSIEIQYLGPYYPLKSTLKRGENGTLIWEQNGQRKTMTRIESKTGREEKDEKSKSLEHHHHHH
General information:
TITO was launched using:
RESULT:
Template:
2JOZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17235 for 517 contacts (-33.3/contact) +
2D Compatibility (PS) -9718 + (NN) 3145 + (LL) 0
1D Compatibility (HY) -3600 + (ID) 750
Total energy: -28158.0 ( -54.46 by residue)
QMean score : -0.016
(partial model without unconserved sides chains):
PDB file :
Tito_2JOZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JOZ-query.scw
PDB file :
Tito_Scwrl_2JOZ.pdb
: