Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSHLVTAPDMLATAAAHVDEIASTLRAANAAAAGPTCNLLAAAGDEVSAATAALFSAYGREYQAVVKQAAAFHSEFTRTLEAAGNAYAHAEAANAARVSHALDTINAPIRTLLGRAPLSPNGSSGAGGLPAIAQLAAESPITALIMGGTNNPLPDPEYVTDINKAFIQTLFPGAVSQGLFTPEQFWPVTPDLGNLTFNQSVTEGVALLNTAVNNQL--ALDNKVVAFGYSQSATIINNYINSLMAM---------GSP---NPDDISFVMIGSGNNPVGGLLARFPGFYIPFLDVPFNGA-TPANSPYPTHIYTAQYDGIAHAPQFPLRILSDINAFMGYFYVHNTYPELMATQVDNAVPLPTSPGYTGNTQYYMFLTQDLPLLQPIRDIPYAGPPIADLFQPQLRVLVDLGYADYGPGGNYADIPTPAGLFSIPNPFAVTYYLIKGSLQAPYGAIVEIGVEAGLIGPEWFPDSYPWVPSINPGLNFYFGQPQVTLLSLMSGGLGNILHLIPPPVFT |
| 1QOZ Chain:A ((4-193)) | -----------------------------------------------------------------------------------------------------------------------------------------CPAIHVFGARETTVSQG-YGSSATVVN-LVIQAHPGTTSEAIVYPACGGQA--SCGGISYANSVVNGTNAAAAAINNFHNSCPDTQLVLVGYSQGAQIFDNALCGGGDPGEGITNTAVPLTAGAVSAVKAAIFMGDPRNIHGLPYNVGTC---TTQGFDARPAGFVCPSASKIKSYCDAADPYCCTGND--------------PNVHQGYGQE----------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QOZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -21371 for 1541 contacts (-13.9/contact) +
2D Compatibility (PS) -18717 + (NN) -12772 + (LL) 18576
1D Compatibility (HY) 8800 + (ID) 400
Total energy: -25884.0 ( -16.80 by residue)
QMean score : 0.192
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