Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTATVEIRRAADRAVTTTSWLKSRHSFSFGDHYDPDNTHHGLLLVNNDDQMEPASGF--DPHPHRDMEIVTWVLRGALRHQDSAGNSGVIYPGLAQRMSAGTGILHSEMNDSATEPVHFVQMWVIPDA-TG-ITASYQQQEIDDELLRAGLVTIASGIPGQ---DAALTLHNSSASLHGARLRPGATVSL-P-CAPFLHLFVAYGRLTLE--GG-GELADGDAVRFTDADARGLTA--NEPSEVLIWEMHAKLGDSAT |
| 1SQ4 Chain:A ((70-266)) | ---------------------------------------------QYIVELAPNGGSDKPEQDPNA-EAVLFVVEGELSLTLQ-GQVHAMQPGGYAFIPP--GADYKVRNTT-GQHTRFHWIRKHYQKVDGVPLPEAFVTNEQDIQP--LVMPDTEGRWSTTRFVDMSDMR-HDMHVNIVNFEPGGVIPFAETHVMEHGLYVLEGKAVYRLNQDWVEVEAGDFMWLRAFCPQACYSGGPGRFRYLLYKDV-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1SQ4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -33900 for 1302 contacts (-26.0/contact) +
2D Compatibility (PS) -18973 + (NN) 2913 + (LL) 3700
1D Compatibility (HY) -800 + (ID) 1250
Total energy: -48310.0 ( -37.10 by residue)
QMean score : 0.254
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