Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNDKMLARIAALLRQAEGTDNPHEADAFMSTAQRLATAASIDLAVARSHAGNRSPAQAPTQRTITIGAAGTRGLRTYVQLFVLIAAANDVRCDVASNSTFVYAYGFAEDIDTSHALYASLVVQMVRASDAYLASGAHRPTPTITARLNFQLAFGARVGQRLADAREQTRQEATKDRDRPPGTAIALRDKDIELHEYYRRSSKARGAWRASRATAGYSSAARRAGDRAGRQARLGNNPELPGARAALGR |
| 5CPM Chain:B ((79-129)) | -------------------------AQAFVPVVQAIKAAGSVP-GIQIAHAGRKASANRPWEGDDHIGADDARGWET---------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5CPM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -57 for 221 contacts (-0.3/contact) +
2D Compatibility (PS) -5303 + (NN) -3066 + (LL) 13728
1D Compatibility (HY) -2400 + (ID) 850
Total energy: 2052.0 ( 9.29 by residue)
QMean score : -0.036
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