Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPELNTARGPIDTADLGVTLMHEHVFIMTTEIAQNYPEAWGDEDKRVAGAIARLGELKARGVDTIVDLTVIGLGRYIPRIARVAAATELNIVVATGLYTYNDVPFYFHYLGPGAQLDGPEIMTDMFVRDIEHGIADTGIKAGILKCATDEPGLTPGVERVLRAVAQAHKRTGAPISTHTHAGLRRGLDQQRIFAEEGVDLSRVVIGHCGDSTDVGYLEELIAAGSYLGMDRF--------------GVDVISPFQDRVNIVARMCERGHADKMVLSHDACCYFDALPEELVPV---AMPNWHYLHIHNDVIPALKQHGVTDEQLHTMLVDNPRRIFERQGGYQ |
1I0D Chain:B ((3-326)) | --RINTVRGPITISEAGFTLTHEHICGSSAGFLRAWPEFFGSRKALAEKAVRGLRRARAAGVRTIVDVSTFDIGRDVSLLAEVSRAADVHIVAATGLWF--DPPLSM-------RLRSVEELTQFFLREIQYGIEDTGIRAGIIKVATTGKA-TPFQELVLKAAARASLATGVPVTTHTAASQRDGEQQAAIFESEGLSPSRVCIGHSDDTDDLSYLTALAARGYLIGLDHIPHSAIGLEDNASASALLGIRSWQTRALLIKALIDQGYMKQILVSNDWLFGFSSYVTNIMDVMDRVNPD-GMAFIPLRVIPFLREKGVPQETLAGITVTNPARFLS------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1I0D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -241909 for 2822 contacts (-85.7/contact) +
2D Compatibility (PS) -32851 + (NN) -9716 + (LL) 472
1D Compatibility (HY) -23200 + (ID) 5700
Total energy: -312904.0 ( -110.88 by residue)
QMean score : 0.608
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