Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPDEPTPPEATTPNSESDP-------RYDSAGVPTFESVREKIETRYGTALGATEL---------DAESPQGRRLEDQYAQRQRAAAERLAQIRESMHTDE------
1R5E Chain:A ((29-133))
--DNVTSSQLLSVRHQLAESAGLPRDQHEFVSSQAPQSLRNRYNNLYSHTQRTLDMADMQHRYMTGASGINPGMLPHENVDDMRSAITDWSDMREALQHAMGIHADI
General information:
TITO was launched using:
RESULT:
Template:
1R5E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 25865 for 481 contacts (53.8/contact) +
2D Compatibility (PS) -9015 + (NN) -1392 + (LL) 68
1D Compatibility (HY) -1200 + (ID) 550
Total energy: 13776.0 ( 28.64 by residue)
QMean score : 0.368
(partial model without unconserved sides chains):
PDB file :
Tito_1R5E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1R5E-query.scw
PDB file :
Tito_Scwrl_1R5E.pdb
: