Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTYRSPDRAWQALADGTRRAIVERLAHGPLAVGELARDLPVSRPAVSQHLKVLKTARLVCDRPAGTRRVYQLDPTGLAALRTDLDRFWTRALTGYAQLIDSEGDDT
4GGG Chain:B ((19-89))
----------FKALGDYNRIRIMELLSVSEASVGHISHQLNLSQSNVSHQLKLLKSAHVVKAKRQGQSMIYSLDDIHVATM--------------------------
General information:
TITO was launched using:
RESULT:
Template:
4GGG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50313 for 474 contacts (-106.1/contact) +
2D Compatibility (PS) -7342 + (NN) -1698 + (LL) 1804
1D Compatibility (HY) -7200 + (ID) 1200
Total energy: -65949.0 ( -139.13 by residue)
QMean score : 0.662
(partial model without unconserved sides chains):
PDB file :
Tito_4GGG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4GGG-query.scw
PDB file :
Tito_Scwrl_4GGG.pdb
: