Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPEIPIAAPDLLGHGRSPWA-APWTIDANVSALAALLDNQGDGP----VVVVGHSFGGAVAMHLAAARPDQVAALVLLDPAVALDGSRVREVVDAMLASPDYLDPAEARAEKATGAWADVDPPVLDAELDEHLVALPNGRYGWRISLPAMVCYWSELARDIVLPPVGTATTLVRAVRASPAYVSDQLLAALDKRLGADFELLDFDCGHMVPQAKPTEVAAVIRSRLGPR |
3PF8 Chain:B ((82-175)) | ---------DFNGHGDSDGKFENMTVLNEIEDANAILNYVKTDPHVRNIYLVGHSQGGVVASMLAGLYPDLIKKVVLLAPAATLKGDALEGNTQGVTYNPDHI------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PF8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -51612 for 525 contacts (-98.3/contact) +
2D Compatibility (PS) -9680 + (NN) -6675 + (LL) 9268
1D Compatibility (HY) -4400 + (ID) 1500
Total energy: -64599.0 ( -123.05 by residue)
QMean score : 0.423
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