Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQIGVPLETHAGETRVSATPETVKKLIGQGHQVIVQSGAGVSASQPDSAYEAAGATIGS-AAEAFG-ADLVLKVVAPSAAE-----LAQMKSGAVLVGMLNPFDNENIAR-MAERGITAFALEAAPRTSRAQSLDVLSSQANIAGYKAVMLAANHYPRFMPMLMTAAGTVKAARVLILGAGVAGLQAIATAKRLGAVIEASDVRPAVKEQIESLGAKFVDVPYETDEERECAEGVGGYARPMPASWMERQAKAVHERAKQSDIVITTALIPGRKAPTLLHEATVAEMKPGSVVIDLAAAQGGNCPLTEADQVVVRHGVTIVGHSNLAALVPADASALYARNILDFL--KLTLNAEGFSVNLEDDIVAACLMCRDGQAVRKNG |
| 2OO5 Chain:B ((1-375)) | MKIAIPKERRPGEDRVAISPEVVKKLVGLGFEVIVEQGAGVGASITDDALTAAGATIASTAAQALSQADVVWKVQRPMTAEEGTDEVALIKEGAVLMCHLGALTNRPVVEALTKRKITAYAMELMPRISRAQSMDILSSQSNLAGYRAVIDGAYEFARAFPMMMTAAGTVPPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGKFITV---DDEAMKTAETAGGYAKEMGEEFRKKQAEAVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNCPLSEPGKIVVKHGVKIVGHTNVPSRVAADASPLFAKNLLNFLTPHVDKDTKTLVMKLEDETVSGTCVTRDGAIVHPAL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2OO5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -240103 for 3193 contacts (-75.2/contact) +
2D Compatibility (PS) -39358 + (NN) -14170 + (LL) 56
1D Compatibility (HY) -33600 + (ID) 9950
Total energy: -337125.0 ( -105.58 by residue)
QMean score : 0.562
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