Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MESRILSLAALTVLE-LSPPDMVEAAARAGYSHVGLRLVPATVEEHHYPLLADAGLRRRTLARLRDSGVRTLDVEILR-----L-RPD-----TRVGEFAAVLEVGAEFGARYVLVAGND--------DDERRSADNFAALCDLARPLGLDPHLEFMPWTGIRDLRQAARVVEAAARDNAGLLLDAFHFDRSASSLEDLRAIPPARLGYAQLCDVVGPRPTSMDEILRQAREERRFPGDGGLDLLALLRALPE---NLPLSLEVPALDLLARGVDGAERARLAIERTRALLARL |
| 3CQJ Chain:A ((16-288)) | --QIPLGIYEKALPAGECWLERLQLAKTLGFDFVEMSVDETDERLS--RLDWSREQRLALVNAIVETGVRVPSMCLSAHRRFPLGSEDDAVRAQGLEIMRKAIQFAQDVGIRVIQLAGYDVYYQEANNETRRRFRDGLKESVEMASRAQVTLAMEIMDYPLMNSISKALGYAHYLNNPWFQLYPDIGNLSAWDNDVQMELQAGIGHIVAVHVKDTKPGV------------FKNVPFGEGVVDFERCFETLKQSGYCGPYLIEMWSETA----EDPAAEVAKARDWVKARMAKA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CQJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -117152 for 2049 contacts (-57.2/contact) +
2D Compatibility (PS) -27610 + (NN) -13162 + (LL) 1660
1D Compatibility (HY) -6400 + (ID) 1850
Total energy: -164514.0 ( -80.29 by residue)
QMean score : 0.573
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