Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTRTVLVLNGPNLNLLGTREPQTYGRRTLGEIADECAAFAETRGFAVDFRQTNQEGQLLDWIHQARGR-VAGIVINPAAWTHTSVALRDALAAVELPVVEVHLSNVHQREAFRHHSYVSPVALGVICGFGSLGYRLALEHFAERFEAAA
4RC9 Chain:J ((1-148))
MSSTILVIHGPNLNLLGKREPEVYGHLTLDNINRQLIAQAEQASITLDTFQSNWEGAIVDRIHQAQTEGVKLIIINPAALTHTSVALRDALLGVAIPFIEVHLSNVHAREAFRHHSYLSDKAIGVICGLGAKGYSFALDYAIEKIQPSN
General information:
TITO was launched using:
RESULT:
Template:
4RC9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -118265 for 1141 contacts (-103.7/contact) +
2D Compatibility (PS) -16188 + (NN) -4346 + (LL) 0
1D Compatibility (HY) -15200 + (ID) 4150
Total energy: -158149.0 ( -138.61 by residue)
QMean score : 0.622
(partial model without unconserved sides chains):
PDB file :
Tito_4RC9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4RC9-query.scw
PDB file :
Tito_Scwrl_4RC9.pdb
: