Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSLPNPAELLPRMASDLRAHLAERGIERPRFVGIHTGGIWVAEALLREL----GNQEPLGTLDVSFYRDDFTQNGLHPQVRPSALPFEIDGQHLVLVDDVLMSGRTIRAALNELFDYGRPASVTLVCLLDLNARELPIRPDVVGQTLSLGRDERVKLVGPAPLALERKVLSSAS
1UFR Chain:B ((27-156))
---------------------ANKGTEGLALVGIHTRGIPLAHRIARFIAEFEGKEVPVGVLDITL-----------PQVRETRIPFDLTGKAIVLVDDVLYTGRTARAALDALIDLGRPRRIYLAVLVDRGHRELPIRADFVGKNVPTSRSEVVKVKVEEVDGEDRVELWER-
General information:
TITO was launched using:
RESULT:
Template:
1UFR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -87189 for 867 contacts (-100.6/contact) +
2D Compatibility (PS) -12510 + (NN) -5178 + (LL) 1680
1D Compatibility (HY) -11600 + (ID) 2800
Total energy: -117597.0 ( -135.64 by residue)
QMean score : 0.633
(partial model without unconserved sides chains):
PDB file :
Tito_1UFR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1UFR-query.scw
PDB file :
Tito_Scwrl_1UFR.pdb
: