Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MARILIVDDSPTEMYKLTAMLEKHGHQVLKAENGGDGVALARQEKPDVVLMDIVMPGLNGFQATRQLTKDAETSAIPVIIVTTKDQETDKVWGKRQGARDYLTKPVDEETLLKTINAVLAG
2WB4 Chain:B ((3-119))
-ARILVVDDIEANVRLLEAKLTAEYYEVSTAMDGPTALAMAARDLPDIILLDVMMPGMDGFTVCRKLKDDPTTRHIPVVLITALDGRGDRIQGLESGASDFLTKPIDDVMLFARVRSLTRF
General information:
TITO was launched using:
RESULT:
Template:
2WB4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42911 for 914 contacts (-46.9/contact) +
2D Compatibility (PS) -12907 + (NN) -10037 + (LL) 208
1D Compatibility (HY) -11600 + (ID) 2200
Total energy: -79447.0 ( -86.92 by residue)
QMean score : 0.673
(partial model without unconserved sides chains):
PDB file :
Tito_2WB4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WB4-query.scw
PDB file :
Tito_Scwrl_2WB4.pdb
: