Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEATRILLGVNIDHVATLRQARGTRYPDPVKAALDAEEAGADGITVHLREDRRHIQERDVRVLKEVLQTRMNFEMGVTEEMLAFAEEIRPAHSCLVPERREELTTEGGLDVAGQEQRIRDAVRRLAAVGSEVSLFIDPDPRQIEASARVGAPAIELHTGRYADAEDPEEQARELQRVREGVALGRSLGLIVNAGHGLHYHNVEPVAAIDGINELNIGHAIVAHALFVGFRQAVAEMKALMLAAATKR
1IXQ Chain:D ((3-240))
------LLLGVNIDHIATLRNARGTAYPDPVQAAFIAEQAGADGITVHLREDRRHITDRDVRILRQTLDTRMNLEMAVTEEMLAIAVETKPHFCCLVPE-------EGGLDVAGQRDKMRDACKRLADAGIQVSLFIDADEEQIKAAAEVGAPFIEIHTGCYADAKTDAEQAQELARIAKAATFAASLGLKVNAGHGLTYHNVKAIAAIPEMHELNIGHAIIGRAVMTGLKDAVAEMKRLMLEARG--
General information:
TITO was launched using:
RESULT:
Template:
1IXQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -142167 for 2074 contacts (-68.5/contact) +
2D Compatibility (PS) -25451 + (NN) -10669 + (LL) 1544
1D Compatibility (HY) -24000 + (ID) 7650
Total energy: -208393.0 ( -100.48 by residue)
QMean score : 0.607
(partial model without unconserved sides chains):
PDB file :
Tito_1IXQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IXQ-query.scw
PDB file :
Tito_Scwrl_1IXQ.pdb
: