Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPNVRNPFDLLLLPTWIVPVEPAGVVLRDHALGIRDGQIALVAPREQAMRHGATEIRELPGMLLAPGLVNAHGHSAMSLFRGL--ADDLPLMTWLQD--HIWPAEGQWVSEDFIRDGTELAIAEQVKGGITCFSD-MYFYPQAI-----CGVVHDSGVRAQVAIPVLDFPIPGARDSA--EAIRQGMAL---FDDLKHHPRIRIAFGPHAPYTVSDDKLEQILVLTEELDASIQMHVHETAFEVEQAMERNGERPLARLHRLGLLGPRFQAVHMTQVDNDDLAMLVETNSSVIHCPESNLKLASGFCPVEKLWQAGVNVAIGTDGAASNNDLDLLGETRTAALLAKAVYGQATALDAHRALRMATLNGARALGLERLIGSLEAGKAADLVAFDLSGLAQQPVY-----DPVSQLIYASGRDCVRHVWVGGRQLLDDGRLLRHDEQRLIARAREWGAKIAASDRS |
| 3HPA Chain:B ((49-466)) | --------------------------LRDAGLYIEDNRIVAVGPSAE-LPETADEVLDLRGHLVIPGLVNTHHHMYQSLTRAVPAAQNAELFGWLTNLYKIW----AHLTPEMIEVSTLTAMAELLQSGCTTSSDHLYIYPNGSRLDDSIGAAQRIGMRFHASRGAMS----------EPDILRDTQRLIETYHDEGRYAMLRVVVAPCSPFSVSRDLMRDAAVLAREYGVSLHTHLAENVNDIAY-------TPAEYAEDLGWVGHDVWHAHCVQLDDAGIGLFARTGTGVAHCPCSNMRLASGIAPVKKMRLAGVPVGLGVDGSASNDGAQMVAEVRQALLLQRVGFGP-DAMTAREALEIATLGGAKVLNRDD-IGALKPGMAADFAAFDL----RQPLFAGALHDPVAALVFCAPSQTAYTV-VNGKVVVREGRLATLDLPPVIER-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HPA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -226235 for 3366 contacts (-67.2/contact) +
2D Compatibility (PS) -39786 + (NN) -15009 + (LL) 3908
1D Compatibility (HY) -24000 + (ID) 6650
Total energy: -307772.0 ( -91.44 by residue)
QMean score : 0.488
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