Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTYLQQHARSIAEPAAFWAEQARSLAW---YQAPANILESLPDGTHRWFADGRLNSAYLALDRQIEEGRGEQTALIYDSPVTGTQDRYSYLRLRDEVARLAGALRALGVGKGDRVIIYMPMVPQAAMAMLACARLGAVHSVVFGGFAPYELALRIDDATPKLVLTASCGLEFDRVIEYKPLVDKALEL-AIHQPAHVMVWQRPQAPARLHPGRDLDWQDCLAAAEPA-DPLPVASGDPLYIMYTSGTTGKPKGIVRDNGGHAVAVRYAVRTIYGMQAGDVWWGISDVGWVVGHSLIVYGPLMCGCTTVFYEGKPVRTPDAGAYWRVIEEHRVNSLFCAPTAIRAIRKEDPHGER-VKRYDLGSLRHLFLAGEKLDSSTQHWLEEHTGR---PVHDHWWQTETGWPVTAPCIGIAGHDLRAGSTNRAVPGYHVQVLDDEGRPLGANRQGAIVIALPLPPGCAQTLWGDHPRYLQAYLGNYPGYYHTGDGGYLDEDGFVYIMGRTDDVINVSGHRLSTGEMEERVAQHQAVAECAVIGVRDELKGHVPLGLVVLKDDAGIAAEQLQRELVALVREQIGALACFQRVVVVKRLPKTRSGKILRAVLRKIADGE-DYAAPSTIDDPTILGEIEAALRVRKAG |
2P2Q Chain:B ((24-647)) | --YETKYKQSINDPDTFWGEQGKILDWITPYQKVKNTSFAPGNVSIKWYEDGTLNLAANCLDRHLQE-NGDRTAIIWEGDDTSQSKHISYRELHRDVCRFANTLLDLGIKKGDVVAIYMPMVPEAAVAMLACARIGAVHSVIFGGFSPEAVAGRIIDSSSRLVITADEGVRAGRSIPLKKNVDDALKNPNVTSVEHVIVLKRTGSDIDWQEGRDLWWRDLIEKASPEHQPEAMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAATTFKYVFDYHPGDIYWCTADVGWVTGHSYLLYGPLACGATTLMFEGVP-NWPTPARMCQVVDKHQVNILYTAPTAIRALMAE---GDKAIEGTDRSSLRILGSVGEPINPEAWEWYWKKIGKEKCPVVDTWWQTETGGFMITPLPGAI--ELKAGSATRPFFGVQPALVDNEGHPQEGATEGNLVITDSW-PGQARTLFGDHERFEQTYFSTFKNMYFSGDGARRDEDGYYWITGRVDDVLNVSGHRLGTAEIESALVAHPKIAEAAVVGIPHAIKGQAIYAYVTLNHGEEPSPE-LYAEVRNWVEKEIGPLATPDVLHWTDSLPKTRSGKIMRRILRKIAAGDT-------LADP---GVVEKLLEEKQA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2P2Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -376781 for 5450 contacts (-69.1/contact) +
2D Compatibility (PS) -66237 + (NN) -32807 + (LL) 408
1D Compatibility (HY) -44400 + (ID) 13000
Total energy: -532817.0 ( -97.76 by residue)
QMean score : 0.591
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