Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAESAFSERIVQNLLDTDFYKLTMMQAVLHNYPNAEVEWEFRCRNQEDLRLYL-PAIREQLEYLAGLAISDEQLAFLERIPFLAPDFIRFLGLFRFNPRYV-QTGIENDEFFLRLKGPWLHVILFEVPLLAMISEVRNRARYPAATVEQARERLQEKFDWL---------RREASAEE--LAGFKMADFGTRRRFSYRVHEAVVSGLKEDFPGCFVGTSNVHLARKLDLKPLGTMAHEWLMAHQQLGPRLIDSQSAALDCWVREYRGLLGIALTDCITTDAFLRDFDLYFAKLFDGLRHDSGDPLLWAEKTIAHYLKLGIDPLTKTLVFSDGLDLPRALKIYRALQGRINVSFGIGTHFTCD-LPGVEPMNIVVKMSACNGHPVAKISDTPGKAQCRDPDFIHYLKHVFQVA |
| 3OS4 Chain:A ((3-395)) | ----QDASPILTSLLDTDAYKLHMQQAVFHHYRHITVAAEFRCRSDE-LLGVYADEIRHQVTLMGQLALTSDEFIYLSSLPFFQDDYLHWLRDFRFKPEQVSVAVHD-GKLDIRIAGLWCEVIMWEVPLLAVISEIVHRRRS---------TQVTTDQAVQQLRTKLEQFNAL--SADIDITHFKLMDFGTRRRFSREIQHTVVSTLKDE-FPYLVGTSNYDLARTLALAPVGTQAHEWFQAHQQISPTLANSQRVALQVWLDEYPNQLGIALTDCITMDAFLRDFDLAFANRYQGLRHDSGDPIEWGEKAIAHYEKLGIDPMKKVLVFSDNLDLEKALFLYRHFYQRIKLVFGIGTRLTCDIPDV-KPLNIVIKLVECNDKPVAKLSDSPGKTICQDPAFVDQLRKAFALP |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OS4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -259775 for 3211 contacts (-80.9/contact) +
2D Compatibility (PS) -40479 + (NN) -18191 + (LL) 1572
1D Compatibility (HY) -40800 + (ID) 9400
Total energy: -367073.0 ( -114.32 by residue)
QMean score : 0.542
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