Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRRTALALPLFLLVSACSSEPTPPPKPAAKPQARTVISPRPVRQSVQPILPLRGDYANNPAAQHFIDRMVSQHGFNRQQLHDLFAQTQRLDWVIRLMDRQAPTYTPPSGPNGAWLRYRKKFVTPGNVQNGVLFWDQYETDLQRASRVYGVPPEIIVGIIGVETRWGRVMGKTRIIDALSTLSFSYPRRAEFFSGELEQFLLQARKEGTDPLALRGSYAGAMGYGQFMPSSFTK----YAVDFDGDGHIDLWNPRDAIGSVANYFKQHGWVSGDRVAVPASGRAPSLEDGFKTLYPLDVLASAGLRPQGPLGGHRQASLLRLDMGRNYQYWYGLPNFYVITRYNHSTHYAMAVWELGKEVDRVRHRSVVRQD |
| 1QSA Chain:A ((448-541)) | -----------------------------------------------------------------------------------------------------------------------------------RFPLAYNDLFKRYTSGKEIPQSYAMAIARQESAWNPKV---------------------------------------------KSPVGASGLMQIMPGTATHTVKMFSIPGY-SSPGQLLDPETNINIGTSYLQYVYQQF---------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QSA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -35748 for 658 contacts (-54.3/contact) +
2D Compatibility (PS) -8717 + (NN) 4088 + (LL) 15948
1D Compatibility (HY) -1200 + (ID) 950
Total energy: -26579.0 ( -40.39 by residue)
QMean score : 0.225
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