Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
------MPRGDKSKYSDKQQRKAEHIEESYKAKGVS---ESEAEARAWATVNKQSGGGERKGGSGRAKSETAKRADRKDSAHRAAQARSGRPANRGSASRGKRQGSTSVSEMTREELMQLARKRDIRGRSTMRKAELIEALSRA
1ETE Chain:A ((1-134))
TQDCSFQHSPISSDFAVKIRELSDYLLQDYPVTVASNLQDDELCGGLWRLVLAQRWMERLKTVAGSKMQGLLERVNTE--IHFVTKCAFQPPPSCL------RFVQTNISRLLQETSEQLVALKPWITRQNFSRCLELQCQP--
General information:
TITO was launched using:
RESULT:
Template:
1ETE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 75749 for 857 contacts (88.4/contact) +
2D Compatibility (PS) -13164 + (NN) -2153 + (LL) 220
1D Compatibility (HY) -2000 + (ID) 1000
Total energy: 57652.0 ( 67.27 by residue)
QMean score : 0.216
(partial model without unconserved sides chains):
PDB file :
Tito_1ETE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ETE-query.scw
PDB file :
Tito_Scwrl_1ETE.pdb
: