Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEAIAKYDFKATADDELSFKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYIEMKPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRSTSVSRNQQIFLRDIEQVPQQPTYVQALFDFDPQEDGELGFRRGDFIHVMDNSDPNWWKGACHGQTGMFPRNYVTPVNRNV
1FYR Chain:B ((8-105))
------------------------------------------------------MKPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRSTSVSRNQQIFLRDIE-----------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1FYR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28093 for 505 contacts (-55.6/contact) +
2D Compatibility (PS) -10896 + (NN) -8946 + (LL) 5912
1D Compatibility (HY) -13600 + (ID) 4900
Total energy: -60523.0 ( -119.85 by residue)
QMean score : 0.240
(partial model without unconserved sides chains):
PDB file :
Tito_1FYR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FYR-query.scw
PDB file :
Tito_Scwrl_1FYR.pdb
: