Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLLLLAALLTAGVTAHSISTRAVWQFRNMIKCTIPGSDPLREYNNYGCYCGLGGSGTPVDDLDRCCQTHDHCYNQAKKLESCKFLIDNPYTNTYSYKCSGNVITCSDKNNDCESFICNCDRQAAICFSKVPYNKEYKDLDTKKHC
4DBK Chain:A ((1-124))
----------------------ALWQFRSMIKCAIPGSHPLMDFNNYGCYCGLGGSGTPVDELDRCCETHDNCYRDAKNLDSCKFLVDNPYTESYSYSCSNTEITCNSKNNACEAFICNCDRNAAICFSKAPYNKEHKNLDTKKYC
General information:
TITO was launched using:
RESULT:
Template:
4DBK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61899 for 910 contacts (-68.0/contact) +
2D Compatibility (PS) -13203 + (NN) -8524 + (LL) 2372
1D Compatibility (HY) -15600 + (ID) 4700
Total energy: -101554.0 ( -111.60 by residue)
QMean score : 0.442
(partial model without unconserved sides chains):
PDB file :
Tito_4DBK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4DBK-query.scw
PDB file :
Tito_Scwrl_4DBK.pdb
: