Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPIPNNPGAGENAFDPVFVNDDDGYDLDSFMIPAHYKKYLTKVLVPNGVIKNRIEKLAYDIKKVYNNEEFHILCLLKGSRGFFTALLKHLSRIHNYSAVETSKPLFGEHYVRVKSYCNDQSTGTLEIVSEDLSCLKGKHVLIVEDIIDTGKTLVKFCEYLKKFEIKTVAIACLFIKRTPLWNGFKADFVGFSIPDHFVVGYSLDYNEIFRDLDHCCLVNDEGKKKYKATSL
3OZF Chain:D ((21-248))
-PIPNNPGAGENAFDPVFVNDDDGYDLDSFMIPAHYKKYLTKVLVPNGVIKNRIEKLAYDIKKVYNNEEFHILCLLKGSRGFFTALLKHLSRIHNYSAVETSKPLFGEHYVRVKSYCNDQSTGTLEIVSEDLSCLKGKHVLIVEDIIDTGKTLVKFCEYLKKFEIKTVAIACLFIKRTPLWNGFKADFVGFSIPDHFVVGYSLDYNEIFRDLDHCCLVNDEGKKKYKAT--
General information:
TITO was launched using:
RESULT:
Template:
3OZF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -201300 for 1833 contacts (-109.8/contact) +
2D Compatibility (PS) -24524 + (NN) -11111 + (LL) 356
1D Compatibility (HY) -36800 + (ID) 11400
Total energy: -284779.0 ( -155.36 by residue)
QMean score : 0.801
(partial model without unconserved sides chains):
PDB file :
Tito_3OZF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OZF-query.scw
PDB file :
Tito_Scwrl_3OZF.pdb
: