Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVIMGRHTWESIGRPLPGRKNIILSSQPGTDDRVTWVKSVDEAIAACGDVPEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYEPDDWESVFSEFHDADAQNSHSYCFEILERR
1DDR Chain:B ((1-159))
MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVIMGRHTWESIGRPLPGRKNIILSSQPGTDDRVTWVKSVDEAIAACGDVPEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYEPDDWESVFSEFHDADAQNSHSYCFEILERR
General information:
TITO was launched using:
RESULT:
Template:
1DDR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -121139 for 1189 contacts (-101.9/contact) +
2D Compatibility (PS) -17477 + (NN) -10122 + (LL) 0
1D Compatibility (HY) -22400 + (ID) 7950
Total energy: -179088.0 ( -150.62 by residue)
QMean score : 0.743
(partial model without unconserved sides chains):
PDB file :
Tito_1DDR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1DDR-query.scw
PDB file :
Tito_Scwrl_1DDR.pdb
: