Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIPPHATLVFDVELLKLE
1QPF Chain:D ((1-107))
-GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIPPHATLVFDVELLKLE
General information:
TITO was launched using:
RESULT:
Template:
1QPF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52972 for 786 contacts (-67.4/contact) +
2D Compatibility (PS) -11911 + (NN) -6374 + (LL) 208
1D Compatibility (HY) -13600 + (ID) 5350
Total energy: -89999.0 ( -114.50 by residue)
QMean score : 0.715
(partial model without unconserved sides chains):
PDB file :
Tito_1QPF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QPF-query.scw
PDB file :
Tito_Scwrl_1QPF.pdb
: