Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGVEIETISPGDGRTFPKKGQTCVVHYTGMLQNGKKFDSSRDRNKPFKFRIGKQEVIKGFEEGAAQMSLGQRAKLTCTPDVAYGATGHPGVIPPNATLIFDVELLNLE
2FKE Chain:A ((1-107))
-GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIPPHATLVFDVELLKLE
General information:
TITO was launched using:
RESULT:
Template:
2FKE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48337 for 790 contacts (-61.2/contact) +
2D Compatibility (PS) -11948 + (NN) -5489 + (LL) 208
1D Compatibility (HY) -12800 + (ID) 4450
Total energy: -82816.0 ( -104.83 by residue)
QMean score : 0.626
(partial model without unconserved sides chains):
PDB file :
Tito_2FKE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FKE-query.scw
PDB file :
Tito_Scwrl_2FKE.pdb
: