Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATVEPETTPTPNPPTTEEEKTESNQEVANPEHYIKHPLQNRWALWFFKNDKSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENREAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGSTTKNRFVV
1EJH Chain:D ((8-190))
----------------------------------IKHPLQNRWALWFFKNDKSKTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLN-----SDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENRDAVTHIGRVYKERLGLPPKIVIGYQSHADT---------NRFVV
General information:
TITO was launched using:
RESULT:
Template:
1EJH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -97923 for 1296 contacts (-75.6/contact) +
2D Compatibility (PS) -17955 + (NN) -8953 + (LL) 1992
1D Compatibility (HY) -26000 + (ID) 8400
Total energy: -157239.0 ( -121.33 by residue)
QMean score : 0.685
(partial model without unconserved sides chains):
PDB file :
Tito_1EJH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EJH-query.scw
PDB file :
Tito_Scwrl_1EJH.pdb
: