Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDKLDANVSSEEGFGSVEKVVLLTFLSTVILMAILGNLLVMVAVCWDRQLRKIKTNYFIVSLAFADLLVSVLVMPFGAIELVQDIWIYGEVFCLVRTSLDVLLTTASIFHLCCISLDRYYAICCQPLVYRNKMTPLRIALMLGGCWVIPTFISFLPIMQGWNNIGIIDLIEKRKFNQNSNSTYCVFMVNKPYAITCSVVAFYIPFLLMVLAYYRIYVTAKEHAHQIQMLQRAGASSESRPQSADQHSTHRMRTETKAAKTLCIIMGCFCLCWAPFFVTNIVDPFIDYTVPGQVWTAFLWLGYINSGLNPFLYAFLNKSFRRAFLIILCCDDERYRRPSILGQTVPCSTTTINGSTHVLRDAVECGGQWESQCHPPATSPLVAAQPSDT |
| 3ZPR Chain:B ((17-299)) | ------------------------LMALVVLLIVAGNVLVIAAIGSTQRLQTL-TNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDRYLAI-TSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDE-----DPQALKCYQDPGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKE---QIRKIDRASKRKTSRVMLMREH---------KALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLL------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZPR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -263884 for 2137 contacts (-123.5/contact) +
2D Compatibility (PS) -28360 + (NN) -790 + (LL) 5864
1D Compatibility (HY) -35200 + (ID) 6200
Total energy: -328570.0 ( -153.75 by residue)
QMean score : 0.304
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