Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MATPRGLGALLLLLLLPTSGQEKPTEGPRNTCLGSNNMYDIFNLNDKALCFTKCRQSGSDSCNVENLQRYWLNYEAHLMKEGLTQKVNTPFLKALVQNLSTNTAEDFYFSLEPSQVPRQVMKDEDKPPDRVRLPKSLFRSLPGNRSVVRLAVTILDIGPGTLFKGPRLGLGDGSGVLNNRLVGLSVGQMHVTKLAEPLEIVFSHQRPPPNMTLTCVFWDVTKGTTGDWSSEGCSTEVRPEGTVCCCDHLTFFALLLRPTLDQSTVHILTRISQAGCGVSMIFLAFTIILYAFLRLSRERFKSEDAPKIHVALGGSLFLLNLAFLVNVGS-----GSKGSDAACWARGAVFHYFLLCAFTWMGLEAFHLYLLAVRVFNTY--FGHYFLKLSLVGWGLPALMVIGTGSA-NSYGLYTIRDRENRTSLELCWFREGT-------TMY---ALYITVHGYFLITFLFGMVVLALVVWKIFTLSRATA--VKERGKNRKKVLTLLGLSSLVGVTWGLAIFTPL-----G-----LSTVYIFALFNSLQGVFICCWFTILYLPSQSTTVSSSTARLDQAHSASQE |
| 1U19 Chain:A ((74-321)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFRFGENHAIMGVAFTWVMALACAAPPLVGWSRYIPE--------GMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFC----YGQLVFTVKEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQFRNCMVTTLCCGKNPLGDDEAS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1U19.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -187563 for 1595 contacts (-117.6/contact) +
2D Compatibility (PS) -21386 + (NN) -303 + (LL) 18480
1D Compatibility (HY) -4000 + (ID) 600
Total energy: -195372.0 ( -122.49 by residue)
QMean score : 0.190
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