Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSNITDPQMWDFDDLNFTGMPPADEDYSPCMLETETLNKYVVIIAYALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALTLPIWAASKVNG-WIFGTFLCKVVSLLKEVNFYSGILLLACISVDRYLAIVHATRTLT-QKRHLVKFVCLGCWGLSMNLSLPFFLFRQAYHPNNSSPVCYEVLGNDTAKWRMVLRILPHTFGFIVPLFVMLFCYGFTLRTLFKAHMGQKHRAMRVIFAVVLIFLL----CWLPYNLVLLADTLMRTQVIQESCERRNNIGRALDATEILGFLHSCLNPIIYAFIGQNFRHGFLKILAMHGLVSKEFLARHRVTSYTSSSVNVSSNL |
| 4EA3 Chain:B ((125-407)) | --------------------------------------KVTIVGLYLAVCVGGLLGNCLVMYVILRHTKMKTATNIYIFNLALADTLVLLTLPFQGTDILLGFWPFGNALCKTVIAIDYYNMFTSTFTLTAMSVDRYVAICHPIRALDVRTSSKAQAVNVAIWALASVVGVPVAIMGSA------EIECLVEIPTPQDYWGPVFAICIFLFSFIVPVLVISVCYSLMIRRL------EKDRNLRRITRLVLVVVAVFVGCWTPVQVFVLAQGLG----VQPSSETAVAILRFCTA---LGYVNSCLNPILYAFLDENFKACFRKF------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EA3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -252184 for 2005 contacts (-125.8/contact) +
2D Compatibility (PS) -27046 + (NN) -11800 + (LL) 4708
1D Compatibility (HY) -30800 + (ID) 4900
Total energy: -322022.0 ( -160.61 by residue)
QMean score : 0.321
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