Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MELAVGNLSEGNASWPEPPAPEPGPLFGIGVENFVTLVVFGLIFALGVLGNSLVITVLARSKPGKPRSTTNLFILNLSIADLAYLLFCIPFQATVYALPTWVLGAFICKFIHYFFTVSMLVSIFTLAAMSVDRYVAIVHSRRSSSLRVSRNALLGVGCIWALSIAMASPVAYHQGLFHPRASNQTFCWEQWPDPR--HKKAYVVCTFVFGYLLPLLLICFCYAKVLNHLHKKLKNM-SKKSEASKKKTAQTVLVVVVVFGISWLPHHI-IHLWAEFGV---FPLTPASFLFRITAHCLAYSNSSVNPIIYAFLSENFRKAYKQVFKCHIRKDSHLSDTKESKSRIDTPPSTNCTHV |
| 4RWA Chain:B ((128-403)) | --------------------------------------LYSAVCAVGLLGNVLVMFGIVRYT--KMKTATNIYIFNLALAD-ALATSTLPFQSAKYLMETWPFGELLCKAVLSIDYYNMFTSIFTLTMMSVDRYIAVCHPVKALDFRTPAKAKLINICIWVLASGVGVPIMV-MAVTRPR-DGAVVCMLQFPSPSWYWDTVTKICVFLFAFVVPILIITVCYGLMLLR--------GSKEKDRSLRRITRMVLVVVGAFVVCWAPIHIFVIVWTLVDIDRRDPLVVAALHLCIA---LGYANSSLNPVLYAFLDENFKRCFR---------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4RWA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -227448 for 1982 contacts (-114.8/contact) +
2D Compatibility (PS) -26371 + (NN) -5546 + (LL) 3828
1D Compatibility (HY) -30000 + (ID) 4750
Total energy: -290287.0 ( -146.46 by residue)
QMean score : 0.266
|
|
|