Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MITFLPIIFSILVVVTFVIGNFANGFIALVNSTEWVKRQKISFADQIVTALAVSRVGLLWVLLLNWYSTVLNPAFCSVELRTTAYNIWAVTGHFSNWPATSLSIFYLLKIANFSNLIFLRLKRRVKSVILVVLLGPLLFLACHLFVVNMNQIVWTKEYEGNMTWKIKLRRAMYLSDTTVTMLANLVPFTVTLISFLLLVCSLCKHLKKMQLHGKGSQDPSTKVHIKVLQTVISFFLLRAIYFVSVII----SVWSFKN-LENKPVFMFCQAIGFSCSSAHPFILIWGNKKLKQTYLSVLWQMRY |
3V2Y Chain:A ((411-495)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SRSSENVALLKTVIIVLSVFIACWAPLFILLLLDVGCKVKTCDILFRAEYFLVLAVLNSGTNPIIYTLTNKEMRRAFIRIMGRPL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3V2Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -22883 for 383 contacts (-59.7/contact) +
2D Compatibility (PS) -8009 + (NN) 139 + (LL) 20828
1D Compatibility (HY) -6000 + (ID) 550
Total energy: -16475.0 ( -43.02 by residue)
QMean score : 0.076
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