Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLRLFYFSAIIASVILNFVGIIMNLFITVVNCKTWVKSHRISSSDRILFSLGITRFLMLGLFLVNTIYFVSSNTERSVYLSAFFVLCFMFLDSSSVWFVTLLNILYCVKITNFQHSVFLLLKRNISPKIPRLLLACVLISAFTTCLYITLSQASPFPELVTTRNNTSFNISEGILSLVVSLVLSSSLQFIINVTSASLLIHSLRRHIQKMQKNATGFWNPQTEAHVGAMKLMVYFLILYIPYSVATLVQYLPFYAGMDMGTKSICLIFATLYSPGHSVLIIITHPKLKTTAKKILCFKK |
| 3J47 Chain:O ((1-28)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GDQITKMKDRLVE-WNDQVEKLGKKMEAR------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J47.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4473 for 104 contacts (43.0/contact) +
2D Compatibility (PS) -2852 + (NN) 650 + (LL) 24800
1D Compatibility (HY) -400 + (ID) 400
Total energy: 26271.0 ( 252.61 by residue)
QMean score : 0.254
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