Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAGRGSLVSWRAFHGCDSAEELPRVSPRFLRAWHPPPVSARMPTRRWAPGTQCITKCEHTRPKPGELAFRKGDVVTILEACENKSWYRVKHHTSGQEGLLAAGALREREALSADPKLSLMPWFHGKISGQEAVQQLQPPED--GLFLVRESARHPGDYVLCVSF-----GRDVIHYRVLHRDGHLTIDEAVFFCNLMDMVEHYSKDKGAICTKLVRPKRKHGTKSAEEELARAGWLLNLQHLTLGAQIGEGEFGAVLQGEYLGQ-KVAVKNIK-CDVTAQAFLDETAVMTKMQHENLVRLLGVILHQGLYIVMEHVSKGNLVNFLRTRGRALVNTAQLLQFSLHVAEGMEYLESKKLVHRDLAARNILVSEDLVAKVSDFGLAKA-ERKGLDSSRLPVKWTAPEALKHGKFTSKSDVWSFGVLLWEVFSYGRAPYPKMSLKEVSEAVEKGYRMEPPEGCPGPVHVLMSSCWEAEPARRPPFRKLAEKLARELRSAGAPASVSGQDADGSTSPRSQEP |
| 4LUD Chain:B ((24-439)) | -----------------------------------------------------------------DLSFQKGDQMVVLE--ESGEWWKARSLATRKEGYIPSNYVARVDSLETEE------WFFKGISRKDAERQLLAPGNMLGSFMIRDSET---SYSLSVRDYDPRQGDTVKHYKI----------------TLQELVDHYKKGNDGLCQKLSVPCMSSKPQKPWEKDA---WEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG--SVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVI----------PIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTATESQYEE---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LUD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -194989 for 2795 contacts (-69.8/contact) +
2D Compatibility (PS) -39451 + (NN) -14112 + (LL) 5976
1D Compatibility (HY) -34400 + (ID) 7650
Total energy: -284626.0 ( -101.83 by residue)
QMean score : 0.463
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