Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AVTCGDVTSAIAPCMSYAT----GKASAP-----SAGCCSGVRTLNGKASTSADRQAACRCLKNLAGSFK-------G---IS----------MGNAATI--PGKCGVSVSFPINTNVNCNNIH
1BEA Chain:A ((15-109))
--------NPLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI--------PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATI-------------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -51809 for 389 contacts (-133.2/contact) +
2D Compatibility (PS) -6537 + (NN) -1586 + (LL) 880
1D Compatibility (HY) -3600 + (ID) 700
Total energy: -63352.0 ( -162.86 by residue)
QMean score : 0.367
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: