Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
IDLCGMTQAELNECLPAVS----K-NNPTSPSLLCCNALKHADYTCLCGYKNSPW------LGSFG---------VDPKLASSLPKECDLTNAPTC
1HSS Chain:A ((12-106))
-----FQVPALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHISEWCRCGALYSMLDSMYKEH----GAFPRCRREVVKLTAASITAVCRLPIVVD-
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -21552 for 413 contacts (-52.2/contact) +
2D Compatibility (PS) -6472 + (NN) -903 + (LL) 4
1D Compatibility (HY) -2400 + (ID) 850
Total energy: -32173.0 ( -77.90 by residue)
QMean score : 0.340
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: