Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
CNINANHLEKCRPAVI----G-DNPPSPIKECCELLQAANLKCICRFKS--------VLPVLA---------VYPSKVQALLSKCGLTTIPPACQALRN
1HSS Chain:A ((13-109))
---QVPALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHISEWCRCGALYSMLDSMYKEH----GAFPRCRREVVKLTAASITAVCRLPIVV-DASG---
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32862 for 371 contacts (-88.6/contact) +
2D Compatibility (PS) -6769 + (NN) 973 + (LL) 608
1D Compatibility (HY) -2000 + (ID) 700
Total energy: -40750.0 ( -109.84 by residue)
QMean score : 0.510
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: