Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
KDECGATPPDQEALKLVPCVAAGKDPDSKPSDRCCAAVKEIGERSPACLCAVLLSKIV------RRVG-----VKPEVAITIPKRCDLTDRPIGYKCGDYTMPSLQLKD
2DS2 Chain:B ((7-63))
------------------------------LRQCCNQLRQV---DRPCVCPVLRQAAQQVLQRQIIQGPQQLRRLFDAARNLPNICNIPN-------------------
General information:
TITO was launched using:
RESULT:
Template:
2DS2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25890 for 233 contacts (-111.1/contact) +
2D Compatibility (PS) -4842 + (NN) -3593 + (LL) 1316
1D Compatibility (HY) -2000 + (ID) 500
Total energy: -35509.0 ( -152.40 by residue)
QMean score : 0.258
(partial model without unconserved sides chains):
PDB file :
Tito_2DS2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DS2-query.scw
PDB file :
Tito_Scwrl_2DS2.pdb
: