Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGRVPVDQVALKLAPCAAATQNPRAAVPPNCCAQVRSIGRNPKCLCAVMLSNTA----R--SAG-----VKPAVAMTIPKRCAIANRPIGYKCGPYTLP
2DS2 Chain:B ((6-63))
-----------------------------ALRQCCNQLRQV--DRPCVCPVLRQAAQQVLQRQIIQGPQQLRRLFDAARNLPNICNIPN-------------
General information:
TITO was launched using:
RESULT:
Template:
2DS2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25193 for 235 contacts (-107.2/contact) +
2D Compatibility (PS) -4834 + (NN) -1667 + (LL) 1932
1D Compatibility (HY) -2800 + (ID) 700
Total energy: -33262.0 ( -141.54 by residue)
QMean score : 0.187
(partial model without unconserved sides chains):
PDB file :
Tito_2DS2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DS2-query.scw
PDB file :
Tito_Scwrl_2DS2.pdb
: