Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AAPSSAQGTTTPADASGAVPSCASKLVTCAGYLNT----TDTP---PESCCDPLKEAATTQAACMCAILMNKA--ALQA-FGV--------APEQGVLLAKRCGVTNDASTCAK
1HSS Chain:A ((15-102))
-----------------------PALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI---SEWCRCGALYSMLDSMYKEH-GAFPRCRREVVKLTAASITAVCRLP--------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36489 for 374 contacts (-97.6/contact) +
2D Compatibility (PS) -6091 + (NN) -893 + (LL) 1236
1D Compatibility (HY) -3600 + (ID) 600
Total energy: -46437.0 ( -124.16 by residue)
QMean score : 0.257
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: