Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VYRPWPSECVEVANVMVEQCKMFFVHQESPPTAECCRWFSSRRKYAKERRRLCRCLEFLTTAFKNLKPDVLALSDQCHFSSGFPMSRDHTCA----------------------
1V74 Chain:B ((1-87))
----------MNKMAMIDLAKLFLASKIT--------AIEFSERICVERRRL--------YGVKDLSPNILNCGEELFMAAE-RFEPDADRANYEIDDNGLKVEVRSILEKFKL
General information:
TITO was launched using:
RESULT:
Template:
1V74.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9082 for 380 contacts (-23.9/contact) +
2D Compatibility (PS) -6619 + (NN) -1988 + (LL) 1800
1D Compatibility (HY) -4000 + (ID) 700
Total energy: -20589.0 ( -54.18 by residue)
QMean score : 0.314
(partial model without unconserved sides chains):
PDB file :
Tito_1V74.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1V74-query.scw
PDB file :
Tito_Scwrl_1V74.pdb
: