Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ITCGQVSSNLVPCFDYVRS----DGP-V-----PPACCNGIRTINGLAKTTPDRQAACNCLKSLAGSVS-------G---VN----------PGNAESL--PGKCGVNVPYKISTSTNCATVK
1BEA Chain:A ((15-109))
-------NPLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI--------PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATI-------------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38661 for 393 contacts (-98.4/contact) +
2D Compatibility (PS) -6343 + (NN) -1058 + (LL) 1356
1D Compatibility (HY) -4400 + (ID) 850
Total energy: -49956.0 ( -127.11 by residue)
QMean score : 0.494
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: