Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AISCGQVTSSLASCIPFLTKGGA-VPASCCSGVRSLNAAAKTTPDRQV-CNCLKSAAGAIPGFNANNAGILPGKCGVSIHYNISTSTNCATIKF
1AFH Chain:A ((1-93))
AISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRVN-
General information:
TITO was launched using:
RESULT:
Template:
1AFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -66801 for 729 contacts (-91.6/contact) +
2D Compatibility (PS) -8974 + (NN) 1006 + (LL) 132
1D Compatibility (HY) -8000 + (ID) 2700
Total energy: -85337.0 ( -117.06 by residue)
QMean score : 0.392
(partial model without unconserved sides chains):
PDB file :
Tito_1AFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1AFH-query.scw
PDB file :
Tito_Scwrl_1AFH.pdb
: