Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AITCGQVSSALSPCIPYARGNGANPSAACCSGVRRIAGAVQSTADKKTACNCI--KRA--AGGLNAGKAADIPSKCSVSIPYAINPSVDCSTIR
1N89 Chain:A ((4-65))
-------ASQLAVCASAILSGA-KPSGECCGNLRA-----------QQGCFCQYAKDPTYGQYIRSPHARDTLTSCGLAVP-------------
General information:
TITO was launched using:
RESULT:
Template:
1N89.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6226 for 353 contacts (-17.6/contact) +
2D Compatibility (PS) -6135 + (NN) -2435 + (LL) 2220
1D Compatibility (HY) -2800 + (ID) 750
Total energy: -16126.0 ( -45.68 by residue)
QMean score : 0.179
(partial model without unconserved sides chains):
PDB file :
Tito_1N89.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1N89-query.scw
PDB file :
Tito_Scwrl_1N89.pdb
: