Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VSCGDAVSALIPCGSFLLGVGAPKPSSECCASAQSLNKLTTTTADRRAVCQCFVKSGPSF-GVKPARTKLLPSLCKLNINIPVTPNVDCNK
2ALG Chain:A ((2-90))
ITCGQVSSSLAPCIPYVRGG--GAVPPACCNGIRNVNNLARTTPDRQAACNCLKQLSASVPGVNPNNAAALPGKCGVSIPYKISASTNCAT
General information:
TITO was launched using:
RESULT:
Template:
2ALG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47846 for 601 contacts (-79.6/contact) +
2D Compatibility (PS) -9049 + (NN) -2703 + (LL) -28
1D Compatibility (HY) -5200 + (ID) 1350
Total energy: -66176.0 ( -110.11 by residue)
QMean score : 0.483
(partial model without unconserved sides chains):
PDB file :
Tito_2ALG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ALG-query.scw
PDB file :
Tito_Scwrl_2ALG.pdb
: