Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ATICNIDTSKLAECLPAVS----G-RSPPPPTKACCTALLSADLHCLCNYKSA--------LPAFGIN---------PALAMALPKKCGGSLPPNCKVDAEP
1HSS Chain:A ((13-106))
------QVPALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHISEWCRCGALYSMLDSMYKEH----GAFPRCRREVVKLTAASITAVCRLPIVVD-------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22236 for 361 contacts (-61.6/contact) +
2D Compatibility (PS) -6723 + (NN) -3647 + (LL) 888
1D Compatibility (HY) -800 + (ID) 600
Total energy: -33118.0 ( -91.74 by residue)
QMean score : 0.289
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: